Dca53863.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold7270)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53863.1 |
14 |
1143 |
1146 |
46.07 |
1130 |
46 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
7 |
1125 |
1307 |
85.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53863.1 |
304 |
1145 |
1146 |
24.08 |
842 |
31 |
2e-115
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
377 |
1211 |
1401 |
59.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7270 |
Augustus |
mRNA |
6993 |
10517 |
. |
- |
. |
ID=Dca53863.1;Parent=Dca53863 |
| scaffold7270 |
Augustus |
exon |
6993 |
7496 |
. |
- |
. |
ID=Dca53863.1.exon1;Parent=Dca53863.1 |
| scaffold7270 |
Augustus |
exon |
7581 |
10517 |
. |
- |
. |
ID=Dca53863.1.exon2;Parent=Dca53863.1 |
