Dca53878.1
Annotation
- 4-exons
- f-3
- sp|Q8S7E7_ORYSJ#Putative transposase#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0057L21.7#GO:0003676#1F0P0C
- Repeat List (scaffold7278)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53878.1 |
2 |
392 |
604 |
36.09 |
391 |
56 |
6e-123
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8S7E7_ORYSJ |
435 |
827 |
1283 |
30.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53878.1 |
3 |
388 |
604 |
33.6 |
386 |
53 |
5e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G19260.1 |
182 |
568 |
769 |
50.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7278 |
Augustus |
mRNA |
663 |
5358 |
. |
+ |
. |
ID=Dca53878.1;Parent=Dca53878 |
| scaffold7278 |
Augustus |
exon |
663 |
1839 |
. |
+ |
. |
ID=Dca53878.1.exon1;Parent=Dca53878.1 |
| scaffold7278 |
Augustus |
exon |
3296 |
3460 |
. |
+ |
. |
ID=Dca53878.1.exon2;Parent=Dca53878.1 |
| scaffold7278 |
Augustus |
exon |
4742 |
4866 |
. |
+ |
. |
ID=Dca53878.1.exon3;Parent=Dca53878.1 |
| scaffold7278 |
Augustus |
exon |
5009 |
5358 |
. |
+ |
. |
ID=Dca53878.1.exon4;Parent=Dca53878.1 |
