Dca5388.1
Annotation
- 4-exons
- f-1
- sp|D7TJA3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g02960#GO:0035091;GO:0007154#1F1P0C
- sp|B9SWH8_RICCO#Sorting nexin 3, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0293470#GO:0035091;GO:0007154#1F1P0C
- Repeat List (scaffold12052)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5388.1 |
1 |
137 |
138 |
81.88 |
137 |
83 |
2e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7TJA3_VITVI |
263 |
399 |
401 |
34.16 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5388.1 |
1 |
138 |
138 |
76.08 |
138 |
77 |
5e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G06140.1 |
264 |
401 |
402 |
34.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12052 |
Augustus |
mRNA |
1026 |
2541 |
. |
+ |
. |
ID=Dca5388.1;Parent=Dca5388 |
| scaffold12052 |
Augustus |
exon |
1026 |
1094 |
. |
+ |
. |
ID=Dca5388.1.exon1;Parent=Dca5388.1 |
| scaffold12052 |
Augustus |
exon |
1273 |
1352 |
. |
+ |
. |
ID=Dca5388.1.exon2;Parent=Dca5388.1 |
| scaffold12052 |
Augustus |
exon |
2192 |
2252 |
. |
+ |
. |
ID=Dca5388.1.exon3;Parent=Dca5388.1 |
| scaffold12052 |
Augustus |
exon |
2335 |
2541 |
. |
+ |
. |
ID=Dca5388.1.exon4;Parent=Dca5388.1 |
