Dca53898.1
Annotation
- 4-exons
- f-1
- sp|B9NAC2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_786969#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold7282)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53898.1 |
102 |
205 |
357 |
9.24 |
104 |
32 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9NAC2_POPTR |
1197 |
1300 |
1386 |
7.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53898.1 |
112 |
185 |
357 |
7.56 |
74 |
37 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G24255.1 |
276 |
349 |
746 |
9.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7282 |
Augustus |
mRNA |
8580 |
11838 |
. |
+ |
. |
ID=Dca53898.1;Parent=Dca53898 |
| scaffold7282 |
Augustus |
exon |
8580 |
8590 |
. |
+ |
. |
ID=Dca53898.1.exon1;Parent=Dca53898.1 |
| scaffold7282 |
Augustus |
exon |
8743 |
9347 |
. |
+ |
. |
ID=Dca53898.1.exon2;Parent=Dca53898.1 |
| scaffold7282 |
Augustus |
exon |
11270 |
11318 |
. |
+ |
. |
ID=Dca53898.1.exon3;Parent=Dca53898.1 |
| scaffold7282 |
Augustus |
exon |
11430 |
11838 |
. |
+ |
. |
ID=Dca53898.1.exon4;Parent=Dca53898.1 |
