Dca53901.1
Annotation
- 2-exons
- f-1
- sp|Q2QQQ7_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g30200#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0006508;GO:0006278#4F2P0C
- Repeat List (scaffold7283)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53901.1 |
2 |
309 |
309 |
50.48 |
308 |
49 |
8e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QQQ7_ORYSJ |
500 |
820 |
1112 |
28.86 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53901.1 |
2 |
309 |
309 |
33.33 |
308 |
30 |
5e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
796 |
1120 |
1539 |
21.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7283 |
Augustus |
mRNA |
296 |
1364 |
. |
+ |
. |
ID=Dca53901.1;Parent=Dca53901 |
| scaffold7283 |
Augustus |
exon |
296 |
649 |
. |
+ |
. |
ID=Dca53901.1.exon1;Parent=Dca53901.1 |
| scaffold7283 |
Augustus |
exon |
789 |
1364 |
. |
+ |
. |
ID=Dca53901.1.exon2;Parent=Dca53901.1 |
