Dca53933.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold7292)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53933.1 |
4 |
295 |
673 |
16.49 |
292 |
38 |
6e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
9 |
296 |
1717 |
16.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53933.1 |
353 |
445 |
673 |
5.05 |
93 |
37 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7292 |
Augustus |
mRNA |
5347 |
7969 |
. |
+ |
. |
ID=Dca53933.1;Parent=Dca53933 |
| scaffold7292 |
Augustus |
exon |
5347 |
6202 |
. |
+ |
. |
ID=Dca53933.1.exon1;Parent=Dca53933.1 |
| scaffold7292 |
Augustus |
exon |
6804 |
7969 |
. |
+ |
. |
ID=Dca53933.1.exon2;Parent=Dca53933.1 |
