Carnation DB

Dca53963.1

Annotation

7-exons
f-1
sp|D7SIB2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g06230#GO:0008270#1F0P0C
sp|B9RLY9_RICCO#Membrane associated ring finger 1,8, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1472160#GO:0008270#1F0P0C
Repeat List (scaffold73)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53963.1	1	279	279	71.32	279	69	3e-96
Target_name	Start	End	Length	Cov(%)
sp\|D7SIB2_VITVI	1	291	291	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53963.1	1	277	279	62	277	61	1e-81
Target_name	Start	End	Length	Cov(%)
AT3G47550.3	1	287	288	99.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold73	Augustus	mRNA	145679	148446	.	+	.	ID=Dca53963.1;Parent=Dca53963
scaffold73	Augustus	exon	145679	145930	.	+	.	ID=Dca53963.1.exon1;Parent=Dca53963.1
scaffold73	Augus-PASA	exon	146596	146667	.	+	.	ID=Dca53963.1.exon2;Parent=Dca53963.1
scaffold73	Augus-PASA	exon	147189	147253	.	+	.	ID=Dca53963.1.exon3;Parent=Dca53963.1
scaffold73	Augus-PASA	exon	147580	147733	.	+	.	ID=Dca53963.1.exon4;Parent=Dca53963.1
scaffold73	Augus-PASA	exon	147961	148044	.	+	.	ID=Dca53963.1.exon5;Parent=Dca53963.1
scaffold73	Augus-PASA	exon	148143	148232	.	+	.	ID=Dca53963.1.exon6;Parent=Dca53963.1
scaffold73	Augus-PASA	exon	148324	148446	.	+	.	ID=Dca53963.1.exon7;Parent=Dca53963.1