Carnation DB

Dca53979.1

Annotation

13-exons
f-1
sp|F6GTA1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g05760#unknown#0F0P0C
sp|B9R952_RICCO#Nuclear protein zap, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1513760#unknown#0F0P0C
Repeat List (scaffold73)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53979.1	1	149	849	7.06	149	39	2e-15
Target_name	Start	End	Length	Cov(%)
sp\|F6GTA1_VITVI	1	142	735	19.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53979.1	426	842	849	27.2	417	54	5e-123
Target_name	Start	End	Length	Cov(%)
AT5G62760.1	241	656	661	62.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold73	Augustus	mRNA	312250	318132	.	-	.	ID=Dca53979.1;Parent=Dca53979
scaffold73	Augustus	exon	312250	312414	.	-	.	ID=Dca53979.1.exon1;Parent=Dca53979.1
scaffold73	Augustus	exon	312537	312623	.	-	.	ID=Dca53979.1.exon2;Parent=Dca53979.1
scaffold73	Augustus	exon	312748	312956	.	-	.	ID=Dca53979.1.exon3;Parent=Dca53979.1
scaffold73	Augustus	exon	313283	313385	.	-	.	ID=Dca53979.1.exon4;Parent=Dca53979.1
scaffold73	Augustus	exon	313519	313563	.	-	.	ID=Dca53979.1.exon5;Parent=Dca53979.1
scaffold73	Augustus	exon	313663	313767	.	-	.	ID=Dca53979.1.exon6;Parent=Dca53979.1
scaffold73	Augustus	exon	314326	314376	.	-	.	ID=Dca53979.1.exon7;Parent=Dca53979.1
scaffold73	Augustus	exon	314898	315002	.	-	.	ID=Dca53979.1.exon8;Parent=Dca53979.1
scaffold73	Augustus	exon	315300	315362	.	-	.	ID=Dca53979.1.exon9;Parent=Dca53979.1
scaffold73	Augustus	exon	315502	315597	.	-	.	ID=Dca53979.1.exon10;Parent=Dca53979.1
scaffold73	Augustus	exon	315720	315832	.	-	.	ID=Dca53979.1.exon11;Parent=Dca53979.1
scaffold73	Augustus	exon	316499	316685	.	-	.	ID=Dca53979.1.exon12;Parent=Dca53979.1
scaffold73	Augustus	exon	316912	318132	.	-	.	ID=Dca53979.1.exon13;Parent=Dca53979.1