Dca53997.1
Annotation
- 4-exons
- f-1
- sp|B9I338_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1095385#GO:0005524;GO:0004674#2F0P0C
- sp|Q56R02_SOLLC#Putative ribosomal-protein S6 kinase-like protein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#GO:0005524;GO:0004674#2F0P0C
- Repeat List (scaffold73)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53997.1 |
5 |
233 |
234 |
77.77 |
229 |
80 |
2e-110
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I338_POPTR |
242 |
469 |
470 |
48.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53997.1 |
6 |
234 |
234 |
61.96 |
229 |
64 |
3e-93
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0334000-02 |
248 |
476 |
481 |
47.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold73 |
Augustus |
mRNA |
442650 |
443672 |
. |
+ |
. |
ID=Dca53997.1;Parent=Dca53997 |
| scaffold73 |
Augustus |
exon |
442650 |
442784 |
. |
+ |
. |
ID=Dca53997.1.exon1;Parent=Dca53997.1 |
| scaffold73 |
Augustus |
exon |
442888 |
443061 |
. |
+ |
. |
ID=Dca53997.1.exon2;Parent=Dca53997.1 |
| scaffold73 |
Augustus |
exon |
443186 |
443293 |
. |
+ |
. |
ID=Dca53997.1.exon3;Parent=Dca53997.1 |
| scaffold73 |
Augustus |
exon |
443385 |
443672 |
. |
+ |
. |
ID=Dca53997.1.exon4;Parent=Dca53997.1 |
