Carnation DB

Dca54025.1

Annotation

7-exons
f-1
sp|B9I5P7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_571109#GO:0005778;GO:0008270#1F0P1C
AT3G04460.1 | Symbols: PEX12, ATPEX12, APM4 | peroxin-12 | chr3:1186641-1189094 FORWARD LENGTH=393
Repeat List (scaffold730)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54025.1	20	248	260	57.69	229	66	3e-82
Target_name	Start	End	Length	Cov(%)
sp\|B9I5P7_POPTR	15	243	393	58.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54025.1	20	248	260	52.3	229	60	1e-76
Target_name	Start	End	Length	Cov(%)
AT3G04460.1	15	243	393	58.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold730	Augustus	mRNA	71779	78257	.	+	.	ID=Dca54025.1;Parent=Dca54025
scaffold730	Augustus	exon	71779	71818	.	+	.	ID=Dca54025.1.exon1;Parent=Dca54025.1
scaffold730	Augustus	exon	72894	72976	.	+	.	ID=Dca54025.1.exon2;Parent=Dca54025.1
scaffold730	Augustus	exon	74938	75043	.	+	.	ID=Dca54025.1.exon3;Parent=Dca54025.1
scaffold730	Augustus	exon	75863	76011	.	+	.	ID=Dca54025.1.exon4;Parent=Dca54025.1
scaffold730	Augustus	exon	76796	77045	.	+	.	ID=Dca54025.1.exon5;Parent=Dca54025.1
scaffold730	Augustus	exon	77995	78104	.	+	.	ID=Dca54025.1.exon6;Parent=Dca54025.1
scaffold730	Augustus	exon	78213	78257	.	+	.	ID=Dca54025.1.exon7;Parent=Dca54025.1