Carnation DB

Dca54053.1

Annotation

8-exons
f-1
sp|F6H0E7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g01090#GO:0003676#1F0P0C
AT1G76010.1 | Symbols: | Alba DNA/RNA-binding protein | chr1:28528505-28530488 REVERSE LENGTH=350
Repeat List (scaffold731)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54053.1	1	264	265	65.66	264	66	1e-71
Target_name	Start	End	Length	Cov(%)
sp\|F6H0E7_VITVI	15	271	271	94.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54053.1	1	143	265	42.26	143	79	3e-61
Target_name	Start	End	Length	Cov(%)
AT1G76010.1	1	143	350	40.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold731	Augus-PASA	mRNA	77226	79948	.	-	.	ID=Dca54053.1;Parent=Dca54053
scaffold731	Augus-PASA	exon	77226	77317	.	-	.	ID=Dca54053.1.exon1;Parent=Dca54053.1
scaffold731	Augustus	exon	77692	77908	.	-	.	ID=Dca54053.1.exon2;Parent=Dca54053.1
scaffold731	Augustus	exon	78037	78095	.	-	.	ID=Dca54053.1.exon3;Parent=Dca54053.1
scaffold731	Augus-PASA	exon	78211	78272	.	-	.	ID=Dca54053.1.exon4;Parent=Dca54053.1
scaffold731	Augus-PASA	exon	79008	79082	.	-	.	ID=Dca54053.1.exon5;Parent=Dca54053.1
scaffold731	Augus-PASA	exon	79169	79257	.	-	.	ID=Dca54053.1.exon6;Parent=Dca54053.1
scaffold731	Augus-PASA	exon	79343	79423	.	-	.	ID=Dca54053.1.exon7;Parent=Dca54053.1
scaffold731	Augustus	exon	79826	79948	.	-	.	ID=Dca54053.1.exon8;Parent=Dca54053.1