Carnation DB

Dca54079.1

Annotation

8-exons
f-1
sp|D7T497_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g03390#GO:0000156;GO:0006355#1F1P0C
sp|B9HM08_POPTR#Pseudo response regulator#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=PtpRR7#GO:0000156;GO:0006355#1F1P0C
Repeat List (scaffold732)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54079.1	564	677	677	7.23	114	43	2e-08
Target_name	Start	End	Length	Cov(%)
sp\|D7T497_VITVI	614	729	769	15.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54079.1	77	488	677	29.98	412	48	1e-89
Target_name	Start	End	Length	Cov(%)
Os03t0284100-01	62	479	746	56.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold732	Augustus	mRNA	96210	102690	.	+	.	ID=Dca54079.1;Parent=Dca54079
scaffold732	Augustus	exon	96210	96573	.	+	.	ID=Dca54079.1.exon1;Parent=Dca54079.1
scaffold732	Augustus	exon	98387	98548	.	+	.	ID=Dca54079.1.exon2;Parent=Dca54079.1
scaffold732	Augustus	exon	98702	98835	.	+	.	ID=Dca54079.1.exon3;Parent=Dca54079.1
scaffold732	Augustus	exon	99112	99258	.	+	.	ID=Dca54079.1.exon4;Parent=Dca54079.1
scaffold732	Augus-PASA	exon	100842	101022	.	+	.	ID=Dca54079.1.exon5;Parent=Dca54079.1
scaffold732	Augus-PASA	exon	101409	101856	.	+	.	ID=Dca54079.1.exon6;Parent=Dca54079.1
scaffold732	Augustus	exon	101931	101959	.	+	.	ID=Dca54079.1.exon7;Parent=Dca54079.1
scaffold732	Augustus	exon	102122	102690	.	+	.	ID=Dca54079.1.exon8;Parent=Dca54079.1