Dca54125.1
Annotation
- 4-exons
- f-1
- sp|Q2AA09_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=20.t00008#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold7335)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54125.1 |
144 |
262 |
525 |
11.42 |
119 |
51 |
2e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA09_ASPOF |
18 |
136 |
275 |
43.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54125.1 |
1 |
106 |
525 |
10.28 |
106 |
51 |
3e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0546750-00 |
103 |
208 |
454 |
23.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7335 |
Augustus |
mRNA |
6919 |
12143 |
. |
- |
. |
ID=Dca54125.1;Parent=Dca54125 |
| scaffold7335 |
Augustus |
exon |
6919 |
7096 |
. |
- |
. |
ID=Dca54125.1.exon1;Parent=Dca54125.1 |
| scaffold7335 |
Augustus |
exon |
7827 |
8798 |
. |
- |
. |
ID=Dca54125.1.exon2;Parent=Dca54125.1 |
| scaffold7335 |
Augustus |
exon |
10949 |
11057 |
. |
- |
. |
ID=Dca54125.1.exon3;Parent=Dca54125.1 |
| scaffold7335 |
Augustus |
exon |
11825 |
12143 |
. |
- |
. |
ID=Dca54125.1.exon4;Parent=Dca54125.1 |
