Carnation DB

Dca54143.1

Annotation

9-exons
f-1
sp|F6HV63_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0066g02330#GO:0005634;GO:0006355#0F1P1C
AT5G15020.1 | Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569 REVERSE LENGTH=1367
Repeat List (scaffold734)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54143.1	245	326	630	5.07	82	37	6e-06
Target_name	Start	End	Length	Cov(%)
sp\|F6HV63_VITVI	919	1005	1385	6.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54143.1	382	628	630	23.96	247	62	2e-83
Target_name	Start	End	Length	Cov(%)
AT5G15020.1	1121	1366	1367	17.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold734	Augustus	mRNA	97127	101939	.	-	.	ID=Dca54143.1;Parent=Dca54143
scaffold734	Augustus	exon	97127	97267	.	-	.	ID=Dca54143.1.exon1;Parent=Dca54143.1
scaffold734	Augustus	exon	97451	97562	.	-	.	ID=Dca54143.1.exon2;Parent=Dca54143.1
scaffold734	Augustus	exon	97643	97806	.	-	.	ID=Dca54143.1.exon3;Parent=Dca54143.1
scaffold734	Augustus	exon	98397	98549	.	-	.	ID=Dca54143.1.exon4;Parent=Dca54143.1
scaffold734	Augustus	exon	98641	98779	.	-	.	ID=Dca54143.1.exon5;Parent=Dca54143.1
scaffold734	Augustus	exon	98868	98929	.	-	.	ID=Dca54143.1.exon6;Parent=Dca54143.1
scaffold734	Augustus	exon	99288	99698	.	-	.	ID=Dca54143.1.exon7;Parent=Dca54143.1
scaffold734	Augustus	exon	101114	101467	.	-	.	ID=Dca54143.1.exon8;Parent=Dca54143.1
scaffold734	Augustus	exon	101583	101939	.	-	.	ID=Dca54143.1.exon9;Parent=Dca54143.1