Dca54182.1
Annotation
- 4-exons
- f-1
- sp|A5AUE6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021034#GO:0005524;GO:0003676;GO:0004674;GO:0005529;GO:0015074;GO:0048544#4F2P0C
- sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
- Repeat List (scaffold7351)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54182.1 |
1 |
77 |
458 |
7.2 |
77 |
43 |
7e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AUE6_VITVI |
1 |
73 |
2026 |
3.6 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54182.1 |
200 |
458 |
458 |
23.36 |
259 |
41 |
2e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
98 |
358 |
1262 |
20.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7351 |
Augustus |
mRNA |
2789 |
6918 |
. |
- |
. |
ID=Dca54182.1;Parent=Dca54182 |
| scaffold7351 |
Augustus |
exon |
2789 |
3633 |
. |
- |
. |
ID=Dca54182.1.exon1;Parent=Dca54182.1 |
| scaffold7351 |
Augustus |
exon |
5274 |
5336 |
. |
- |
. |
ID=Dca54182.1.exon2;Parent=Dca54182.1 |
| scaffold7351 |
Augustus |
exon |
6322 |
6556 |
. |
- |
. |
ID=Dca54182.1.exon3;Parent=Dca54182.1 |
| scaffold7351 |
Augustus |
exon |
6685 |
6918 |
. |
- |
. |
ID=Dca54182.1.exon4;Parent=Dca54182.1 |
