Carnation DB

Dca54192.1

Annotation

6-exons
f-1
sp|B9SZP8_RICCO#Protein-tyrosine phosphatase mitochondrial 1, mitochondrial, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0006390#GO:0004725;GO:0008138#2F0P0C
Repeat List (scaffold7356)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54192.1	43	350	350	56.85	308	65	2e-113
Target_name	Start	End	Length	Cov(%)
sp\|B9SZP8_RICCO	26	333	333	92.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54192.1	1	350	350	54	350	53	3e-97
Target_name	Start	End	Length	Cov(%)
AT2G35680.1	1	337	337	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7356	Augustus	mRNA	26981	29687	.	-	.	ID=Dca54192.1;Parent=Dca54192
scaffold7356	Augustus	exon	26981	27367	.	-	.	ID=Dca54192.1.exon1;Parent=Dca54192.1
scaffold7356	Augustus	exon	27551	27640	.	-	.	ID=Dca54192.1.exon2;Parent=Dca54192.1
scaffold7356	Augustus	exon	27737	27819	.	-	.	ID=Dca54192.1.exon3;Parent=Dca54192.1
scaffold7356	Augus-PASA	exon	27998	28091	.	-	.	ID=Dca54192.1.exon4;Parent=Dca54192.1
scaffold7356	Augus-PASA	exon	28797	28919	.	-	.	ID=Dca54192.1.exon5;Parent=Dca54192.1
scaffold7356	Augus-PASA	exon	29412	29687	.	-	.	ID=Dca54192.1.exon6;Parent=Dca54192.1