Dca54215.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold7364)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54215.1 |
73 |
295 |
764 |
10.6 |
223 |
32 |
5e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
261 |
1717 |
14.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54215.1 |
439 |
531 |
764 |
4.05 |
93 |
34 |
4e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7364 |
Augustus |
mRNA |
11388 |
14074 |
. |
- |
. |
ID=Dca54215.1;Parent=Dca54215 |
| scaffold7364 |
Augustus |
exon |
11388 |
12541 |
. |
- |
. |
ID=Dca54215.1.exon1;Parent=Dca54215.1 |
| scaffold7364 |
Augustus |
exon |
12628 |
12835 |
. |
- |
. |
ID=Dca54215.1.exon2;Parent=Dca54215.1 |
| scaffold7364 |
Augustus |
exon |
13042 |
13605 |
. |
- |
. |
ID=Dca54215.1.exon3;Parent=Dca54215.1 |
| scaffold7364 |
Augustus |
exon |
13706 |
14074 |
. |
- |
. |
ID=Dca54215.1.exon4;Parent=Dca54215.1 |
