Dca54259.1
Annotation
- 2-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|Q2QUJ5_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g16050#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold738)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54259.1 |
1 |
637 |
637 |
65.62 |
637 |
62 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
600 |
1278 |
1553 |
43.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54259.1 |
8 |
634 |
637 |
39.56 |
627 |
40 |
3e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
605 |
1236 |
1539 |
41.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold738 |
Augustus |
mRNA |
96075 |
98108 |
. |
- |
. |
ID=Dca54259.1;Parent=Dca54259 |
| scaffold738 |
Augustus |
exon |
96075 |
96913 |
. |
- |
. |
ID=Dca54259.1.exon1;Parent=Dca54259.1 |
| scaffold738 |
Augustus |
exon |
97034 |
98108 |
. |
- |
. |
ID=Dca54259.1.exon2;Parent=Dca54259.1 |
