Dca5426.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold12073)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5426.1 |
528 |
665 |
666 |
14.11 |
138 |
69 |
2e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1175 |
1312 |
1501 |
9.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5426.1 |
528 |
647 |
666 |
7.5 |
120 |
42 |
5e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1168 |
1287 |
1539 |
7.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12073 |
Augustus |
mRNA |
2887 |
6918 |
. |
- |
. |
ID=Dca5426.1;Parent=Dca5426 |
| scaffold12073 |
Augustus |
exon |
2887 |
3293 |
. |
- |
. |
ID=Dca5426.1.exon1;Parent=Dca5426.1 |
| scaffold12073 |
Augustus |
exon |
5325 |
6918 |
. |
- |
. |
ID=Dca5426.1.exon2;Parent=Dca5426.1 |
