Carnation DB

Dca54313.1

Annotation

6-exons
f-1
sp|D7T6Q6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g02600#GO:0016020#0F0P1C
sp|B9RSR7_RICCO#Membrane protein PB1A10.07c, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0678100#GO:0016020#0F0P1C
Repeat List (scaffold7399)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54313.1	1	411	411	80.77	411	81	0
Target_name	Start	End	Length	Cov(%)
sp\|D7T6Q6_VITVI	1	411	411	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54313.1	3	411	411	76.15	409	77	1e-180
Target_name	Start	End	Length	Cov(%)
AT3G06170.1	4	409	409	99.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7399	Augus-PASA	mRNA	1662	4985	.	+	.	ID=Dca54313.1;Parent=Dca54313
scaffold7399	Augus-PASA	exon	1662	1836	.	+	.	ID=Dca54313.1.exon1;Parent=Dca54313.1
scaffold7399	Augus-PASA	exon	3161	3394	.	+	.	ID=Dca54313.1.exon2;Parent=Dca54313.1
scaffold7399	Augus-PASA	exon	3617	3728	.	+	.	ID=Dca54313.1.exon3;Parent=Dca54313.1
scaffold7399	Augus-PASA	exon	3812	3986	.	+	.	ID=Dca54313.1.exon4;Parent=Dca54313.1
scaffold7399	Augus-PASA	exon	4338	4581	.	+	.	ID=Dca54313.1.exon5;Parent=Dca54313.1
scaffold7399	Augus-PASA	exon	4690	4985	.	+	.	ID=Dca54313.1.exon6;Parent=Dca54313.1