Dca5435.1
Annotation
- 4-exons
- f-1
- sp|B9R9Y1_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1501550#GO:0005488#1F0P0C
- Os04t0548300-01 Armadillo-type fold domain containing protein.
- Repeat List (scaffold1208)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5435.1 |
3 |
2128 |
2128 |
50.46 |
2126 |
50 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9R9Y1_RICCO |
2 |
2129 |
2130 |
99.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5435.1 |
3 |
690 |
2128 |
15.31 |
688 |
48 |
9e-176
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G06530.2 |
2 |
687 |
2199 |
31.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1208 |
Augustus |
mRNA |
67999 |
75747 |
. |
- |
. |
ID=Dca5435.1;Parent=Dca5435 |
| scaffold1208 |
Augustus |
exon |
67999 |
68229 |
. |
- |
. |
ID=Dca5435.1.exon1;Parent=Dca5435.1 |
| scaffold1208 |
Augustus |
exon |
68353 |
68791 |
. |
- |
. |
ID=Dca5435.1.exon2;Parent=Dca5435.1 |
| scaffold1208 |
Augustus |
exon |
68895 |
74448 |
. |
- |
. |
ID=Dca5435.1.exon3;Parent=Dca5435.1 |
| scaffold1208 |
Augustus |
exon |
75585 |
75747 |
. |
- |
. |
ID=Dca5435.1.exon4;Parent=Dca5435.1 |
