Carnation DB

Dca54371.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q7Y1N4_ORYSJ#Putative retrotransposon gag protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0053G10.17#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold7401)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54371.1	6	543	627	39.71	538	38	1e-92
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	132	756	1717	36.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54371.1	354	426	627	4.3	73	37	4e-07
Target_name	Start	End	Length	Cov(%)
Os09t0122300-01	77	148	150	48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7401	Augustus	mRNA	6137	13140	.	-	.	ID=Dca54371.1;Parent=Dca54371
scaffold7401	Augustus	exon	6137	6212	.	-	.	ID=Dca54371.1.exon1;Parent=Dca54371.1
scaffold7401	Augustus	exon	10987	11491	.	-	.	ID=Dca54371.1.exon2;Parent=Dca54371.1
scaffold7401	Augustus	exon	11677	12579	.	-	.	ID=Dca54371.1.exon3;Parent=Dca54371.1
scaffold7401	Augustus	exon	12657	12988	.	-	.	ID=Dca54371.1.exon4;Parent=Dca54371.1
scaffold7401	Augustus	exon	13073	13140	.	-	.	ID=Dca54371.1.exon5;Parent=Dca54371.1