Carnation DB

Dca54403.1

Annotation

5-exons
f-82
sp|B9R9S0_RICCO#Trehalose-6-phosphate synthase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1500340#GO:0003824;GO:0005992#1F1P0C
Repeat List (scaffold741)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54403.1	1	166	168	64.28	166	64	3e-56
Target_name	Start	End	Length	Cov(%)
sp\|B9R9S0_RICCO	1	165	386	42.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54403.1	1	166	168	57.73	166	57	1e-45
Target_name	Start	End	Length	Cov(%)
AT5G51460.3	1	166	385	43.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold741	Augustus	mRNA	109154	110102	.	+	.	ID=Dca54403.1;Parent=Dca54403
scaffold741	Augustus	exon	109154	109161	.	+	.	ID=Dca54403.1.exon1;Parent=Dca54403.1
scaffold741	Augustus	exon	109240	109287	.	+	.	ID=Dca54403.1.exon2;Parent=Dca54403.1
scaffold741	Augustus	exon	109393	109714	.	+	.	ID=Dca54403.1.exon3;Parent=Dca54403.1
scaffold741	Augustus	exon	109807	109947	.	+	.	ID=Dca54403.1.exon4;Parent=Dca54403.1
scaffold741	Augustus	exon	110034	110102	.	+	.	ID=Dca54403.1.exon5;Parent=Dca54403.1