Carnation DB

Dca54408.1

Annotation

7-exons
f-1
sp|F6HPH6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g01240#GO:0005794;GO:0016021;GO:0008378;GO:0005529;GO:0006486#2F1P2C
AT5G62620.1 | Symbols: | Galactosyltransferase family protein | chr5:25137136-25139764 FORWARD LENGTH=681
Repeat List (scaffold7412)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54408.1	1	675	675	70.22	675	71	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HPH6_VITVI	1	670	670	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54408.1	1	675	675	66.51	675	66	0
Target_name	Start	End	Length	Cov(%)
AT5G62620.1	9	681	681	98.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7412	Augus-PASA	mRNA	8274	11838	.	-	.	ID=Dca54408.1;Parent=Dca54408
scaffold7412	Augus-PASA	exon	8274	8483	.	-	.	ID=Dca54408.1.exon1;Parent=Dca54408.1
scaffold7412	Augus-PASA	exon	8632	8739	.	-	.	ID=Dca54408.1.exon2;Parent=Dca54408.1
scaffold7412	Augus-PASA	exon	9055	9228	.	-	.	ID=Dca54408.1.exon3;Parent=Dca54408.1
scaffold7412	Augus-PASA	exon	9323	9451	.	-	.	ID=Dca54408.1.exon4;Parent=Dca54408.1
scaffold7412	Augustus	exon	9574	9864	.	-	.	ID=Dca54408.1.exon5;Parent=Dca54408.1
scaffold7412	Augustus	exon	9949	10181	.	-	.	ID=Dca54408.1.exon6;Parent=Dca54408.1
scaffold7412	Augustus	exon	10956	11838	.	-	.	ID=Dca54408.1.exon7;Parent=Dca54408.1