Dca54414.1
Annotation
- 2-exons
- f-1
- sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold7417)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54414.1 |
1 |
423 |
427 |
61.35 |
423 |
55 |
4e-141
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GBG5_CUCME |
366 |
838 |
1038 |
45.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54414.1 |
136 |
331 |
427 |
15.22 |
196 |
33 |
4e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
585 |
781 |
1428 |
13.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7417 |
Augustus |
mRNA |
8405 |
9854 |
. |
+ |
. |
ID=Dca54414.1;Parent=Dca54414 |
| scaffold7417 |
Augustus |
exon |
8405 |
8800 |
. |
+ |
. |
ID=Dca54414.1.exon1;Parent=Dca54414.1 |
| scaffold7417 |
Augustus |
exon |
8967 |
9854 |
. |
+ |
. |
ID=Dca54414.1.exon2;Parent=Dca54414.1 |
