Carnation DB

Dca54420.1

Annotation

5-exons
f-1
sp|A5BIP9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002670#unknown#0F0P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold742)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54420.1	1	191	284	38.38	191	44	2e-46
Target_name	Start	End	Length	Cov(%)
sp\|A5BIP9_VITVI	400	652	660	38.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54420.1	193	284	284	15.14	92	38	1e-15
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	793	908	1539	7.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold742	Augustus	mRNA	36194	38806	.	+	.	ID=Dca54420.1;Parent=Dca54420
scaffold742	Augustus	exon	36194	36348	.	+	.	ID=Dca54420.1.exon1;Parent=Dca54420.1
scaffold742	Augustus	exon	36733	36948	.	+	.	ID=Dca54420.1.exon2;Parent=Dca54420.1
scaffold742	Augustus	exon	37237	37438	.	+	.	ID=Dca54420.1.exon3;Parent=Dca54420.1
scaffold742	Augustus	exon	38450	38622	.	+	.	ID=Dca54420.1.exon4;Parent=Dca54420.1
scaffold742	Augustus	exon	38698	38806	.	+	.	ID=Dca54420.1.exon5;Parent=Dca54420.1