Dca54443.1
Annotation
- 4-exons
- f-1
- sp|B9HM15_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_563814#GO:0008287;GO:0046872;GO:0004722;GO:0006470#2F1P1C
- AT3G12620.1 | Symbols: | Protein phosphatase 2C family protein | chr3:4009510-4010993 REVERSE LENGTH=385
- Repeat List (scaffold743)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54443.1 |
1 |
378 |
378 |
76.71 |
378 |
77 |
6e-172
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HM15_POPTR |
7 |
386 |
386 |
98.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54443.1 |
1 |
372 |
378 |
75.39 |
372 |
77 |
3e-170
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G12620.1 |
8 |
380 |
385 |
96.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold743 |
Augustus |
mRNA |
1106 |
3207 |
. |
+ |
. |
ID=Dca54443.1;Parent=Dca54443 |
| scaffold743 |
Augustus |
exon |
1106 |
1406 |
. |
+ |
. |
ID=Dca54443.1.exon1;Parent=Dca54443.1 |
| scaffold743 |
Augustus |
exon |
1803 |
2170 |
. |
+ |
. |
ID=Dca54443.1.exon2;Parent=Dca54443.1 |
| scaffold743 |
Augustus |
exon |
2629 |
2865 |
. |
+ |
. |
ID=Dca54443.1.exon3;Parent=Dca54443.1 |
| scaffold743 |
Augustus |
exon |
2977 |
3207 |
. |
+ |
. |
ID=Dca54443.1.exon4;Parent=Dca54443.1 |
