Carnation DB

Dca54482.1

Annotation

6-exons
f-1
sp|G7ID19_MEDTR#RNA-binding protein with multiple splicing#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_1g099190#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold744)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54482.1	1	247	254	54.72	247	56	2e-66
Target_name	Start	End	Length	Cov(%)
sp\|G7ID19_MEDTR	1	244	252	96.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54482.1	1	253	254	50.78	253	51	3e-55
Target_name	Start	End	Length	Cov(%)
AT1G76940.1	1	230	233	98.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold744	Augus-PASA	mRNA	104161	109235	.	-	.	ID=Dca54482.1;Parent=Dca54482
scaffold744	Augus-PASA	exon	104161	104258	.	-	.	ID=Dca54482.1.exon1;Parent=Dca54482.1
scaffold744	Augus-PASA	exon	104782	104863	.	-	.	ID=Dca54482.1.exon2;Parent=Dca54482.1
scaffold744	Augus-PASA	exon	105383	105444	.	-	.	ID=Dca54482.1.exon3;Parent=Dca54482.1
scaffold744	Augus-PASA	exon	105537	105840	.	-	.	ID=Dca54482.1.exon4;Parent=Dca54482.1
scaffold744	Augus-PASA	exon	105992	106125	.	-	.	ID=Dca54482.1.exon5;Parent=Dca54482.1
scaffold744	Augus-PASA	exon	109151	109235	.	-	.	ID=Dca54482.1.exon6;Parent=Dca54482.1