Carnation DB

Dca54499.1

Annotation

23-exons
f-1
sp|B8B845_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_26740#GO:0005524;GO:0003677;GO:0004519;GO:0004386#4F0P0C
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein | chr5:2491412-2498484 REVERSE LENGTH=1190
Repeat List (scaffold7449)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54499.1	13	1124	1142	45.44	1112	44	0
Target_name	Start	End	Length	Cov(%)
sp\|B8B845_ORYSI	3	1165	1165	99.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54499.1	768	1124	1142	16.72	357	52	1e-101
Target_name	Start	End	Length	Cov(%)
AT5G07810.1	818	1180	1190	30.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7449	Augustus	mRNA	2919	13697	.	+	.	ID=Dca54499.1;Parent=Dca54499
scaffold7449	Augustus	exon	2919	3308	.	+	.	ID=Dca54499.1.exon1;Parent=Dca54499.1
scaffold7449	Augustus	exon	3948	4307	.	+	.	ID=Dca54499.1.exon2;Parent=Dca54499.1
scaffold7449	Augustus	exon	4762	4894	.	+	.	ID=Dca54499.1.exon3;Parent=Dca54499.1
scaffold7449	Augustus	exon	5905	6080	.	+	.	ID=Dca54499.1.exon4;Parent=Dca54499.1
scaffold7449	Augustus	exon	6214	6287	.	+	.	ID=Dca54499.1.exon5;Parent=Dca54499.1
scaffold7449	Augustus	exon	6393	6428	.	+	.	ID=Dca54499.1.exon6;Parent=Dca54499.1
scaffold7449	Augustus	exon	6555	6645	.	+	.	ID=Dca54499.1.exon7;Parent=Dca54499.1
scaffold7449	Augustus	exon	6904	6963	.	+	.	ID=Dca54499.1.exon8;Parent=Dca54499.1
scaffold7449	Augustus	exon	7269	7434	.	+	.	ID=Dca54499.1.exon9;Parent=Dca54499.1
scaffold7449	Augustus	exon	7862	8058	.	+	.	ID=Dca54499.1.exon10;Parent=Dca54499.1
scaffold7449	Augustus	exon	8168	8269	.	+	.	ID=Dca54499.1.exon11;Parent=Dca54499.1
scaffold7449	Augustus	exon	8839	8949	.	+	.	ID=Dca54499.1.exon12;Parent=Dca54499.1
scaffold7449	Augustus	exon	9095	9160	.	+	.	ID=Dca54499.1.exon13;Parent=Dca54499.1
scaffold7449	Augustus	exon	9247	9345	.	+	.	ID=Dca54499.1.exon14;Parent=Dca54499.1
scaffold7449	Augustus	exon	10006	10146	.	+	.	ID=Dca54499.1.exon15;Parent=Dca54499.1
scaffold7449	Augustus	exon	11013	11132	.	+	.	ID=Dca54499.1.exon16;Parent=Dca54499.1
scaffold7449	Augustus	exon	11382	11675	.	+	.	ID=Dca54499.1.exon17;Parent=Dca54499.1
scaffold7449	Augustus	exon	11778	11962	.	+	.	ID=Dca54499.1.exon18;Parent=Dca54499.1
scaffold7449	Augustus	exon	12233	12335	.	+	.	ID=Dca54499.1.exon19;Parent=Dca54499.1
scaffold7449	Augustus	exon	12425	12570	.	+	.	ID=Dca54499.1.exon20;Parent=Dca54499.1
scaffold7449	Augustus	exon	12790	12869	.	+	.	ID=Dca54499.1.exon21;Parent=Dca54499.1
scaffold7449	Augustus	exon	13001	13155	.	+	.	ID=Dca54499.1.exon22;Parent=Dca54499.1
scaffold7449	Augustus	exon	13554	13697	.	+	.	ID=Dca54499.1.exon23;Parent=Dca54499.1