Dca54520.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7455)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54520.1 |
1 |
272 |
274 |
36.86 |
272 |
31 |
5e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
137 |
462 |
1501 |
21.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54520.1 |
87 |
130 |
274 |
8.02 |
44 |
47 |
1e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0111000-01 |
861 |
905 |
952 |
4.72 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7455 |
Augustus |
mRNA |
2380 |
3295 |
. |
+ |
. |
ID=Dca54520.1;Parent=Dca54520 |
| scaffold7455 |
Augustus |
exon |
2380 |
2609 |
. |
+ |
. |
ID=Dca54520.1.exon1;Parent=Dca54520.1 |
| scaffold7455 |
Augustus |
exon |
2701 |
3295 |
. |
+ |
. |
ID=Dca54520.1.exon2;Parent=Dca54520.1 |
