Dca54554.1
Annotation
- 2-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q9LRQ9_ARATH#Reverse transcriptase-like protein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0000287;GO:0003723;GO:0003964;GO:0010333;GO:0006278#4F1P0C
- Repeat List (scaffold747)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54554.1 |
2 |
183 |
385 |
16.62 |
182 |
35 |
2e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
370 |
549 |
1110 |
16.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54554.1 |
182 |
378 |
385 |
17.14 |
197 |
34 |
6e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0643433-00 |
158 |
356 |
644 |
30.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold747 |
Augustus |
mRNA |
15629 |
17049 |
. |
+ |
. |
ID=Dca54554.1;Parent=Dca54554 |
| scaffold747 |
Augustus |
exon |
15629 |
16151 |
. |
+ |
. |
ID=Dca54554.1.exon1;Parent=Dca54554.1 |
| scaffold747 |
Augustus |
exon |
16415 |
17049 |
. |
+ |
. |
ID=Dca54554.1.exon2;Parent=Dca54554.1 |
