Carnation DB

Dca54610.1

Annotation

5-exons
f-1
sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os03t0643433-00 Similar to J013022N21, full insert sequence.
Repeat List (scaffold7487)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54610.1	303	1232	1242	25.6	930	31	5e-126
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG1_BETVU	80	1110	1110	92.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54610.1	701	1054	1242	9.25	354	33	4e-52
Target_name	Start	End	Length	Cov(%)
Os03t0643433-00	70	422	644	54.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7487	Augustus	mRNA	7515	12022	.	-	.	ID=Dca54610.1;Parent=Dca54610
scaffold7487	Augustus	exon	7515	8089	.	-	.	ID=Dca54610.1.exon1;Parent=Dca54610.1
scaffold7487	Augustus	exon	8177	9227	.	-	.	ID=Dca54610.1.exon2;Parent=Dca54610.1
scaffold7487	Augustus	exon	9535	10725	.	-	.	ID=Dca54610.1.exon3;Parent=Dca54610.1
scaffold7487	Augustus	exon	10976	11806	.	-	.	ID=Dca54610.1.exon4;Parent=Dca54610.1
scaffold7487	Augustus	exon	11942	12022	.	-	.	ID=Dca54610.1.exon5;Parent=Dca54610.1