Dca54624.1
Annotation
- 3-exons
- f-1
- sp|Q9FL75_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold749)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54624.1 |
491 |
660 |
661 |
16.18 |
170 |
63 |
3e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FL75_ARATH |
853 |
1022 |
1109 |
15.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54624.1 |
492 |
658 |
661 |
11.19 |
167 |
45 |
1e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
345 |
511 |
1262 |
13.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold749 |
Augustus |
mRNA |
66936 |
69432 |
. |
+ |
. |
ID=Dca54624.1;Parent=Dca54624 |
| scaffold749 |
Augustus |
exon |
66936 |
67875 |
. |
+ |
. |
ID=Dca54624.1.exon1;Parent=Dca54624.1 |
| scaffold749 |
Augustus |
exon |
68139 |
68672 |
. |
+ |
. |
ID=Dca54624.1.exon2;Parent=Dca54624.1 |
| scaffold749 |
Augustus |
exon |
68921 |
69432 |
. |
+ |
. |
ID=Dca54624.1.exon3;Parent=Dca54624.1 |
