Dca54634.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold7493)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54634.1 |
17 |
217 |
261 |
58.23 |
201 |
76 |
2e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
1343 |
1543 |
1717 |
11.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54634.1 |
44 |
98 |
261 |
14.55 |
55 |
70 |
1e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00750.1 |
35 |
89 |
119 |
46.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7493 |
Augustus |
mRNA |
18695 |
19765 |
. |
- |
. |
ID=Dca54634.1;Parent=Dca54634 |
| scaffold7493 |
Augustus |
exon |
18695 |
18814 |
. |
- |
. |
ID=Dca54634.1.exon1;Parent=Dca54634.1 |
| scaffold7493 |
Augustus |
exon |
18962 |
19579 |
. |
- |
. |
ID=Dca54634.1.exon2;Parent=Dca54634.1 |
| scaffold7493 |
Augustus |
exon |
19718 |
19765 |
. |
- |
. |
ID=Dca54634.1.exon3;Parent=Dca54634.1 |
