Dca54656.1
Annotation
- 4-exons
- f-1
- sp|A5CBQ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013115#GO:0003676;GO:0015074#1F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold75)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54656.1 |
309 |
1045 |
1050 |
34.85 |
737 |
47 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5CBQ4_VITVI |
119 |
869 |
1178 |
63.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54656.1 |
326 |
1045 |
1050 |
23.33 |
720 |
32 |
1e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1090 |
1401 |
50.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold75 |
Augustus |
mRNA |
91375 |
94836 |
. |
+ |
. |
ID=Dca54656.1;Parent=Dca54656 |
| scaffold75 |
Augustus |
exon |
91375 |
92224 |
. |
+ |
. |
ID=Dca54656.1.exon1;Parent=Dca54656.1 |
| scaffold75 |
Augustus |
exon |
92335 |
93588 |
. |
+ |
. |
ID=Dca54656.1.exon2;Parent=Dca54656.1 |
| scaffold75 |
Augustus |
exon |
93705 |
94112 |
. |
+ |
. |
ID=Dca54656.1.exon3;Parent=Dca54656.1 |
| scaffold75 |
Augustus |
exon |
94196 |
94836 |
. |
+ |
. |
ID=Dca54656.1.exon4;Parent=Dca54656.1 |
