Carnation DB

Dca54671.1

Annotation

7-exons
f-1
sp|A5BLN0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_033250#unknown#0F0P0C
Os05t0519500-02 WD40/YVTN repeat-like domain containing protein.
Repeat List (scaffold75)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54671.1	1	892	892	78.81	892	78	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BLN0_VITVI	1	901	901	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54671.1	1	887	892	71.3	887	71	0
Target_name	Start	End	Length	Cov(%)
AT1G15440.1	1	895	900	99.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold75	Augustus	mRNA	248325	252615	.	+	.	ID=Dca54671.1;Parent=Dca54671
scaffold75	Augustus	exon	248325	249542	.	+	.	ID=Dca54671.1.exon1;Parent=Dca54671.1
scaffold75	Augustus	exon	250078	250329	.	+	.	ID=Dca54671.1.exon2;Parent=Dca54671.1
scaffold75	Augustus	exon	250430	250522	.	+	.	ID=Dca54671.1.exon3;Parent=Dca54671.1
scaffold75	Augus-PASA	exon	250703	251074	.	+	.	ID=Dca54671.1.exon4;Parent=Dca54671.1
scaffold75	Augus-PASA	exon	251243	251587	.	+	.	ID=Dca54671.1.exon5;Parent=Dca54671.1
scaffold75	Augus-PASA	exon	251741	251968	.	+	.	ID=Dca54671.1.exon6;Parent=Dca54671.1
scaffold75	Augustus	exon	252445	252615	.	+	.	ID=Dca54671.1.exon7;Parent=Dca54671.1