Carnation DB

Dca54672.1

Annotation

6-exons
f-1
sp|F6HX93_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g06060#unknown#0F0P0C
Os01t0649000-01 WD40 repeat-like domain containing protein.
Repeat List (scaffold75)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54672.1	2	269	269	55.76	268	54	1e-69
Target_name	Start	End	Length	Cov(%)
sp\|F6HX93_VITVI	325	602	602	46.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54672.1	53	255	269	42	203	56	2e-48
Target_name	Start	End	Length	Cov(%)
Os01t0649000-01	397	593	608	32.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold75	Augustus	mRNA	255605	257676	.	+	.	ID=Dca54672.1;Parent=Dca54672
scaffold75	Augustus	exon	255605	255722	.	+	.	ID=Dca54672.1.exon1;Parent=Dca54672.1
scaffold75	Augus-PASA	exon	256345	256577	.	+	.	ID=Dca54672.1.exon2;Parent=Dca54672.1
scaffold75	Augus-PASA	exon	256652	256734	.	+	.	ID=Dca54672.1.exon3;Parent=Dca54672.1
scaffold75	Augus-PASA	exon	256996	257107	.	+	.	ID=Dca54672.1.exon4;Parent=Dca54672.1
scaffold75	Augus-PASA	exon	257322	257396	.	+	.	ID=Dca54672.1.exon5;Parent=Dca54672.1
scaffold75	Augus-PASA	exon	257488	257676	.	+	.	ID=Dca54672.1.exon6;Parent=Dca54672.1