Carnation DB

Dca54676.1

Annotation

8-exons
f-1
sp|F6HES3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0090g01870#GO:0016021;GO:0005524#1F0P1C
Os01t0173900-01 Similar to MRP-like ABC transporter.
Repeat List (scaffold75)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54676.1	4	1246	1251	66.5	1243	66	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HES3_VITVI	96	1364	1364	93.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54676.1	7	1248	1251	64.58	1242	64	0
Target_name	Start	End	Length	Cov(%)
AT3G13080.1	244	1514	1514	83.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold75	Augustus	mRNA	309473	314003	.	+	.	ID=Dca54676.1;Parent=Dca54676
scaffold75	Augustus	exon	309473	311164	.	+	.	ID=Dca54676.1.exon1;Parent=Dca54676.1
scaffold75	Augustus	exon	311270	311356	.	+	.	ID=Dca54676.1.exon2;Parent=Dca54676.1
scaffold75	Augustus	exon	311446	312063	.	+	.	ID=Dca54676.1.exon3;Parent=Dca54676.1
scaffold75	Augustus	exon	312164	312328	.	+	.	ID=Dca54676.1.exon4;Parent=Dca54676.1
scaffold75	Augustus	exon	312416	312710	.	+	.	ID=Dca54676.1.exon5;Parent=Dca54676.1
scaffold75	Augustus	exon	312788	313002	.	+	.	ID=Dca54676.1.exon6;Parent=Dca54676.1
scaffold75	Augustus	exon	313097	313402	.	+	.	ID=Dca54676.1.exon7;Parent=Dca54676.1
scaffold75	Augustus	exon	313626	314003	.	+	.	ID=Dca54676.1.exon8;Parent=Dca54676.1