Carnation DB

Dca54677.1

Annotation

13-exons
f-1
sp|B9S5T2_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0654100#unknown#0F0P0C
AT3G14010.1 | Symbols: CID4 | CTC-interacting domain 4 | chr3:4637164-4640691 FORWARD LENGTH=595
Repeat List (scaffold75)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54677.1	1	574	574	56.79	574	51	2e-152
Target_name	Start	End	Length	Cov(%)
sp\|B9S5T2_RICCO	1	634	634	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54677.1	45	573	574	41.46	529	43	2e-88
Target_name	Start	End	Length	Cov(%)
AT3G14010.1	85	595	595	85.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold75	Augus-PASA	mRNA	315026	322014	.	-	.	ID=Dca54677.1;Parent=Dca54677
scaffold75	Augus-PASA	exon	315026	315055	.	-	.	ID=Dca54677.1.exon1;Parent=Dca54677.1
scaffold75	Augus-PASA	exon	315210	315272	.	-	.	ID=Dca54677.1.exon2;Parent=Dca54677.1
scaffold75	Augus-PASA	exon	315603	315707	.	-	.	ID=Dca54677.1.exon3;Parent=Dca54677.1
scaffold75	Augus-PASA	exon	315904	316050	.	-	.	ID=Dca54677.1.exon4;Parent=Dca54677.1
scaffold75	Augus-PASA	exon	316554	316867	.	-	.	ID=Dca54677.1.exon5;Parent=Dca54677.1
scaffold75	Augus-PASA	exon	318172	318205	.	-	.	ID=Dca54677.1.exon6;Parent=Dca54677.1
scaffold75	Augustus	exon	318304	318358	.	-	.	ID=Dca54677.1.exon7;Parent=Dca54677.1
scaffold75	Augustus	exon	318488	318597	.	-	.	ID=Dca54677.1.exon8;Parent=Dca54677.1
scaffold75	Augustus	exon	320011	320235	.	-	.	ID=Dca54677.1.exon9;Parent=Dca54677.1
scaffold75	Augustus	exon	320327	320507	.	-	.	ID=Dca54677.1.exon10;Parent=Dca54677.1
scaffold75	Augustus	exon	320686	320876	.	-	.	ID=Dca54677.1.exon11;Parent=Dca54677.1
scaffold75	Augustus	exon	321211	321347	.	-	.	ID=Dca54677.1.exon12;Parent=Dca54677.1
scaffold75	Augustus	exon	321882	322014	.	-	.	ID=Dca54677.1.exon13;Parent=Dca54677.1