Carnation DB

Dca54722.1

Annotation

7-exons
f-1
sp|B9SKQ1_RICCO#Brca1 associated ring domain, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0543260#GO:0005622;GO:0008270#1F0P1C
Repeat List (scaffold751)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54722.1	1	297	301	39.2	297	30	1e-38
Target_name	Start	End	Length	Cov(%)
sp\|B9SKQ1_RICCO	1	394	744	52.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54722.1	9	297	301	32.22	289	31	8e-28
Target_name	Start	End	Length	Cov(%)
Os04t0512400-01	6	294	630	45.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold751	Augus-PASA	mRNA	79414	81467	.	-	.	ID=Dca54722.1;Parent=Dca54722
scaffold751	Augus-PASA	exon	79414	79530	.	-	.	ID=Dca54722.1.exon1;Parent=Dca54722.1
scaffold751	Augus-PASA	exon	79667	79909	.	-	.	ID=Dca54722.1.exon2;Parent=Dca54722.1
scaffold751	Augus-PASA	exon	79994	80238	.	-	.	ID=Dca54722.1.exon3;Parent=Dca54722.1
scaffold751	Augus-PASA	exon	80324	80410	.	-	.	ID=Dca54722.1.exon4;Parent=Dca54722.1
scaffold751	Augus-PASA	exon	80988	81058	.	-	.	ID=Dca54722.1.exon5;Parent=Dca54722.1
scaffold751	Augus-PASA	exon	81186	81239	.	-	.	ID=Dca54722.1.exon6;Parent=Dca54722.1
scaffold751	Augus-PASA	exon	81379	81467	.	-	.	ID=Dca54722.1.exon7;Parent=Dca54722.1