Dca54733.1
Annotation
- 3-exons
- f-1
- sp|Q688L2_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=P0636E04.8#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold7512)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54733.1 |
272 |
1468 |
1478 |
42.35 |
1197 |
50 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q688L2_ORYSJ |
451 |
1678 |
1679 |
73.13 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54733.1 |
373 |
1464 |
1478 |
23.47 |
1092 |
32 |
3e-149
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1388 |
1401 |
72.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7512 |
Augustus |
mRNA |
1429 |
9718 |
. |
+ |
. |
ID=Dca54733.1;Parent=Dca54733 |
| scaffold7512 |
Augustus |
exon |
1429 |
4729 |
. |
+ |
. |
ID=Dca54733.1.exon1;Parent=Dca54733.1 |
| scaffold7512 |
Augustus |
exon |
8107 |
8242 |
. |
+ |
. |
ID=Dca54733.1.exon2;Parent=Dca54733.1 |
| scaffold7512 |
Augustus |
exon |
8719 |
9718 |
. |
+ |
. |
ID=Dca54733.1.exon3;Parent=Dca54733.1 |
