Carnation DB

Dca54749.1

Annotation

6-exons
f-1
sp|B9S2F8_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0699220#unknown#0F0P0C
Repeat List (scaffold752)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54749.1	1	265	265	62.26	265	59	1e-78
Target_name	Start	End	Length	Cov(%)
sp\|B9S2F8_RICCO	1	265	265	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54749.1	91	265	265	43.77	175	64	1e-62
Target_name	Start	End	Length	Cov(%)
Os03t0802900-01	84	265	266	68.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold752	Augus-PASA	mRNA	55437	57584	.	+	.	ID=Dca54749.1;Parent=Dca54749
scaffold752	Augus-PASA	exon	55437	55709	.	+	.	ID=Dca54749.1.exon1;Parent=Dca54749.1
scaffold752	Augus-PASA	exon	56400	56585	.	+	.	ID=Dca54749.1.exon2;Parent=Dca54749.1
scaffold752	Augus-PASA	exon	56691	56756	.	+	.	ID=Dca54749.1.exon3;Parent=Dca54749.1
scaffold752	Augus-PASA	exon	56885	56953	.	+	.	ID=Dca54749.1.exon4;Parent=Dca54749.1
scaffold752	Augus-PASA	exon	57044	57115	.	+	.	ID=Dca54749.1.exon5;Parent=Dca54749.1
scaffold752	Augus-PASA	exon	57453	57584	.	+	.	ID=Dca54749.1.exon6;Parent=Dca54749.1