Dca54777.1
Annotation
- 3-exons
- f-1
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold753)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54777.1 |
18 |
269 |
337 |
44.8 |
252 |
57 |
6e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FZN9_ARATH |
1313 |
1573 |
1864 |
14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54777.1 |
215 |
286 |
337 |
11.27 |
72 |
53 |
1e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00750.1 |
35 |
106 |
119 |
60.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold753 |
Augustus |
mRNA |
4343 |
7249 |
. |
- |
. |
ID=Dca54777.1;Parent=Dca54777 |
| scaffold753 |
Augustus |
exon |
4343 |
4545 |
. |
- |
. |
ID=Dca54777.1.exon1;Parent=Dca54777.1 |
| scaffold753 |
Augustus |
exon |
6090 |
6854 |
. |
- |
. |
ID=Dca54777.1.exon2;Parent=Dca54777.1 |
| scaffold753 |
Augustus |
exon |
7204 |
7249 |
. |
- |
. |
ID=Dca54777.1.exon3;Parent=Dca54777.1 |
