Carnation DB

Dca54803.1

Annotation

33-exons
f-1
sp|F6HF39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g02270#GO:0005524;GO:0004674#2F0P0C
AT3G07980.1 | Symbols: MAPKKK6, MAP3KE2 | mitogen-activated protein kinase kinase kinase 6 | chr3:2543893-2551092 REVERSE LENGTH=1367
Repeat List (scaffold754)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54803.1	313	764	1810	13.59	452	48	4e-104
Target_name	Start	End	Length	Cov(%)
sp\|F6HF39_VITVI	1	447	1405	31.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54803.1	309	675	1810	11.54	367	51	5e-98
Target_name	Start	End	Length	Cov(%)
AT3G13530.1	17	386	1368	27.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold754	Augus-PASA	mRNA	12468	44302	.	+	.	ID=Dca54803.1;Parent=Dca54803
scaffold754	Augus-PASA	exon	12468	12651	.	+	.	ID=Dca54803.1.exon1;Parent=Dca54803.1
scaffold754	Augus-PASA	exon	14803	15018	.	+	.	ID=Dca54803.1.exon2;Parent=Dca54803.1
scaffold754	Augus-PASA	exon	15693	15820	.	+	.	ID=Dca54803.1.exon3;Parent=Dca54803.1
scaffold754	Augus-PASA	exon	15928	16050	.	+	.	ID=Dca54803.1.exon4;Parent=Dca54803.1
scaffold754	Augus-PASA	exon	16207	16296	.	+	.	ID=Dca54803.1.exon5;Parent=Dca54803.1
scaffold754	Augus-PASA	exon	16533	16619	.	+	.	ID=Dca54803.1.exon6;Parent=Dca54803.1
scaffold754	Augus-PASA	exon	16879	16958	.	+	.	ID=Dca54803.1.exon7;Parent=Dca54803.1
scaffold754	Augustus	exon	17597	17624	.	+	.	ID=Dca54803.1.exon8;Parent=Dca54803.1
scaffold754	Augustus	exon	20918	21052	.	+	.	ID=Dca54803.1.exon9;Parent=Dca54803.1
scaffold754	Augustus	exon	22654	22727	.	+	.	ID=Dca54803.1.exon10;Parent=Dca54803.1
scaffold754	Augustus	exon	22815	22905	.	+	.	ID=Dca54803.1.exon11;Parent=Dca54803.1
scaffold754	Augustus	exon	24347	24442	.	+	.	ID=Dca54803.1.exon12;Parent=Dca54803.1
scaffold754	Augustus	exon	24813	24915	.	+	.	ID=Dca54803.1.exon13;Parent=Dca54803.1
scaffold754	Augustus	exon	26346	26488	.	+	.	ID=Dca54803.1.exon14;Parent=Dca54803.1
scaffold754	Augustus	exon	26591	26662	.	+	.	ID=Dca54803.1.exon15;Parent=Dca54803.1
scaffold754	Augustus	exon	27881	27984	.	+	.	ID=Dca54803.1.exon16;Parent=Dca54803.1
scaffold754	Augustus	exon	29452	29533	.	+	.	ID=Dca54803.1.exon17;Parent=Dca54803.1
scaffold754	Augustus	exon	30728	31174	.	+	.	ID=Dca54803.1.exon18;Parent=Dca54803.1
scaffold754	Augustus	exon	31626	31729	.	+	.	ID=Dca54803.1.exon19;Parent=Dca54803.1
scaffold754	Augustus	exon	33190	33271	.	+	.	ID=Dca54803.1.exon20;Parent=Dca54803.1
scaffold754	Augustus	exon	34456	34902	.	+	.	ID=Dca54803.1.exon21;Parent=Dca54803.1
scaffold754	Augustus	exon	35497	35769	.	+	.	ID=Dca54803.1.exon22;Parent=Dca54803.1
scaffold754	Augustus	exon	35864	35908	.	+	.	ID=Dca54803.1.exon23;Parent=Dca54803.1
scaffold754	Augustus	exon	36154	36234	.	+	.	ID=Dca54803.1.exon24;Parent=Dca54803.1
scaffold754	Augustus	exon	36355	36438	.	+	.	ID=Dca54803.1.exon25;Parent=Dca54803.1
scaffold754	Augustus	exon	37171	37262	.	+	.	ID=Dca54803.1.exon26;Parent=Dca54803.1
scaffold754	Augustus	exon	38754	39085	.	+	.	ID=Dca54803.1.exon27;Parent=Dca54803.1
scaffold754	Augustus	exon	39166	39567	.	+	.	ID=Dca54803.1.exon28;Parent=Dca54803.1
scaffold754	Augustus	exon	40834	41201	.	+	.	ID=Dca54803.1.exon29;Parent=Dca54803.1
scaffold754	Augustus	exon	41412	41546	.	+	.	ID=Dca54803.1.exon30;Parent=Dca54803.1
scaffold754	Augustus	exon	42325	42731	.	+	.	ID=Dca54803.1.exon31;Parent=Dca54803.1
scaffold754	Augustus	exon	42958	43072	.	+	.	ID=Dca54803.1.exon32;Parent=Dca54803.1
scaffold754	Augustus	exon	44120	44302	.	+	.	ID=Dca54803.1.exon33;Parent=Dca54803.1