Carnation DB

Dca5485.1

Annotation

6-exons
f-1
sp|B9HJI8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_766209#GO:0005622;GO:0008270#1F0P1C
Repeat List (scaffold121)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5485.1	49	183	222	20.27	135	31	2e-08
Target_name	Start	End	Length	Cov(%)
sp\|B9HJI8_POPTR	13	151	222	62.61

AtOs (Arabidopsis thaliana & Oryza sativa)

No data

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold121	Augustus	mRNA	212632	215339	.	+	.	ID=Dca5485.1;Parent=Dca5485
scaffold121	Augustus	exon	212632	212682	.	+	.	ID=Dca5485.1.exon1;Parent=Dca5485.1
scaffold121	Augustus	exon	213502	213567	.	+	.	ID=Dca5485.1.exon2;Parent=Dca5485.1
scaffold121	Augustus	exon	213658	213939	.	+	.	ID=Dca5485.1.exon3;Parent=Dca5485.1
scaffold121	Augustus	exon	214036	214155	.	+	.	ID=Dca5485.1.exon4;Parent=Dca5485.1
scaffold121	Augustus	exon	214270	214356	.	+	.	ID=Dca5485.1.exon5;Parent=Dca5485.1
scaffold121	Augustus	exon	215277	215339	.	+	.	ID=Dca5485.1.exon6;Parent=Dca5485.1