Carnation DB

Dca54903.1

Annotation

9-exons
f-1
sp|B9HUY9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_833893#unknown#0F0P0C
AT5G03760.1 | Symbols: ATCSLA09, CSLA09, ATCSLA9, CSLA9, RAT4 | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:985910-990087 REVERSE LENGTH=533
Repeat List (scaffold7572)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54903.1	3	533	533	79.36	531	80	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HUY9_POPTR	2	529	530	99.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54903.1	3	533	533	74.67	531	75	0
Target_name	Start	End	Length	Cov(%)
AT5G03760.1	2	532	533	99.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7572	Augus-PASA	mRNA	6408	11336	.	-	.	ID=Dca54903.1;Parent=Dca54903
scaffold7572	Augus-PASA	exon	6408	6567	.	-	.	ID=Dca54903.1.exon1;Parent=Dca54903.1
scaffold7572	Augus-PASA	exon	6676	6873	.	-	.	ID=Dca54903.1.exon2;Parent=Dca54903.1
scaffold7572	Augus-PASA	exon	7132	7331	.	-	.	ID=Dca54903.1.exon3;Parent=Dca54903.1
scaffold7572	Augus-PASA	exon	7476	7589	.	-	.	ID=Dca54903.1.exon4;Parent=Dca54903.1
scaffold7572	Augus-PASA	exon	7726	7862	.	-	.	ID=Dca54903.1.exon5;Parent=Dca54903.1
scaffold7572	Augustus	exon	8081	8191	.	-	.	ID=Dca54903.1.exon6;Parent=Dca54903.1
scaffold7572	Augustus	exon	10433	10685	.	-	.	ID=Dca54903.1.exon7;Parent=Dca54903.1
scaffold7572	Augustus	exon	10793	10891	.	-	.	ID=Dca54903.1.exon8;Parent=Dca54903.1
scaffold7572	Augustus	exon	11007	11336	.	-	.	ID=Dca54903.1.exon9;Parent=Dca54903.1