Carnation DB

Dca54933.1

Annotation

12-exons
f-1
sp|G7LFT0_MEDTR#Putative uncharacterized protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_8g095160#unknown#0F0P0C
Os03t0703300-01 Calponin-like actin-binding domain containing protein.
Repeat List (scaffold758)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54933.1	29	162	856	8.87	134	57	6e-38
Target_name	Start	End	Length	Cov(%)
sp\|G7LFT0_MEDTR	36	169	863	15.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54933.1	9	158	856	9.92	150	57	1e-39
Target_name	Start	End	Length	Cov(%)
Os03t0703300-01	14	157	542	26.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold758	Augustus	mRNA	100131	109597	.	+	.	ID=Dca54933.1;Parent=Dca54933
scaffold758	Augustus	exon	100131	100244	.	+	.	ID=Dca54933.1.exon1;Parent=Dca54933.1
scaffold758	Augustus	exon	101075	101166	.	+	.	ID=Dca54933.1.exon2;Parent=Dca54933.1
scaffold758	Augustus	exon	101432	101579	.	+	.	ID=Dca54933.1.exon3;Parent=Dca54933.1
scaffold758	Augustus	exon	101754	101885	.	+	.	ID=Dca54933.1.exon4;Parent=Dca54933.1
scaffold758	Augustus	exon	102529	102620	.	+	.	ID=Dca54933.1.exon5;Parent=Dca54933.1
scaffold758	Augustus	exon	102877	103024	.	+	.	ID=Dca54933.1.exon6;Parent=Dca54933.1
scaffold758	Augustus	exon	103199	103330	.	+	.	ID=Dca54933.1.exon7;Parent=Dca54933.1
scaffold758	Augustus	exon	103432	103572	.	+	.	ID=Dca54933.1.exon8;Parent=Dca54933.1
scaffold758	Augustus	exon	103714	104793	.	+	.	ID=Dca54933.1.exon9;Parent=Dca54933.1
scaffold758	Augustus	exon	105144	105259	.	+	.	ID=Dca54933.1.exon10;Parent=Dca54933.1
scaffold758	Augustus	exon	105364	105452	.	+	.	ID=Dca54933.1.exon11;Parent=Dca54933.1
scaffold758	Augustus	exon	109311	109597	.	+	.	ID=Dca54933.1.exon12;Parent=Dca54933.1