Dca54980.1
Annotation
- 4-exons
- f-1
- sp|Q0PEL6_BETVU#Putative integrase#Beta vulgaris (Sugar beet)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold7599)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54980.1 |
60 |
213 |
274 |
29.92 |
154 |
54 |
1e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q0PEL6_BETVU |
565 |
705 |
1516 |
9.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54980.1 |
66 |
212 |
274 |
16.78 |
147 |
31 |
2e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
361 |
510 |
1428 |
10.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7599 |
Augustus |
mRNA |
4492 |
10508 |
. |
+ |
. |
ID=Dca54980.1;Parent=Dca54980 |
| scaffold7599 |
Augustus |
exon |
4492 |
4662 |
. |
+ |
. |
ID=Dca54980.1.exon1;Parent=Dca54980.1 |
| scaffold7599 |
Augustus |
exon |
5897 |
6366 |
. |
+ |
. |
ID=Dca54980.1.exon2;Parent=Dca54980.1 |
| scaffold7599 |
Augustus |
exon |
7339 |
7423 |
. |
+ |
. |
ID=Dca54980.1.exon3;Parent=Dca54980.1 |
| scaffold7599 |
Augustus |
exon |
10410 |
10508 |
. |
+ |
. |
ID=Dca54980.1.exon4;Parent=Dca54980.1 |
