Carnation DB

Dca54985.1

Annotation

12-exons
f-1
sp|B9HNV8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1087966#GO:0005634;GO:0000808;GO:0005524;GO:0017111;GO:0008270;GO:0006260#3F1P2C
AT4G12620.1 | Symbols: ORC1B, ATORC1B, UNE13 | origin of replication complex 1B | chr4:7459812-7462253 REVERSE LENGTH=813
Repeat List (scaffold76)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54985.1	19	847	847	65.17	829	66	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HNV8_POPTR	17	814	814	98.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54985.1	156	847	847	57.61	692	71	0
Target_name	Start	End	Length	Cov(%)
AT4G12620.1	129	813	813	84.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold76	Augustus	mRNA	59567	63707	.	-	.	ID=Dca54985.1;Parent=Dca54985
scaffold76	Augustus	exon	59567	59630	.	-	.	ID=Dca54985.1.exon1;Parent=Dca54985.1
scaffold76	Augustus	exon	59749	59832	.	-	.	ID=Dca54985.1.exon2;Parent=Dca54985.1
scaffold76	Augustus	exon	59947	60469	.	-	.	ID=Dca54985.1.exon3;Parent=Dca54985.1
scaffold76	Augustus	exon	60577	60634	.	-	.	ID=Dca54985.1.exon4;Parent=Dca54985.1
scaffold76	Augustus	exon	60727	60888	.	-	.	ID=Dca54985.1.exon5;Parent=Dca54985.1
scaffold76	Augustus	exon	60981	61103	.	-	.	ID=Dca54985.1.exon6;Parent=Dca54985.1
scaffold76	Augustus	exon	61197	61296	.	-	.	ID=Dca54985.1.exon7;Parent=Dca54985.1
scaffold76	Augustus	exon	61370	61521	.	-	.	ID=Dca54985.1.exon8;Parent=Dca54985.1
scaffold76	Augustus	exon	61607	61762	.	-	.	ID=Dca54985.1.exon9;Parent=Dca54985.1
scaffold76	Augustus	exon	61859	62008	.	-	.	ID=Dca54985.1.exon10;Parent=Dca54985.1
scaffold76	Augustus	exon	62262	62397	.	-	.	ID=Dca54985.1.exon11;Parent=Dca54985.1
scaffold76	Augustus	exon	62872	63707	.	-	.	ID=Dca54985.1.exon12;Parent=Dca54985.1