Carnation DB

Dca54999.1

Annotation

21-exons
f-1
sp|B9HNH0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_557695#GO:0005096;GO:0007165#1F1P0C
Os07t0658300-01 RhoGAP domain containing protein.
Repeat List (scaffold76)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54999.1	2	842	842	79.69	841	79	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HNH0_POPTR	19	872	872	97.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54999.1	2	842	842	70.19	841	69	0
Target_name	Start	End	Length	Cov(%)
AT5G19390.1	22	870	870	97.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold76	Augustus	mRNA	129460	139087	.	-	.	ID=Dca54999.1;Parent=Dca54999
scaffold76	Augustus	exon	129460	129645	.	-	.	ID=Dca54999.1.exon1;Parent=Dca54999.1
scaffold76	Augustus	exon	129801	130004	.	-	.	ID=Dca54999.1.exon2;Parent=Dca54999.1
scaffold76	Augustus	exon	130241	130310	.	-	.	ID=Dca54999.1.exon3;Parent=Dca54999.1
scaffold76	Augustus	exon	130993	131129	.	-	.	ID=Dca54999.1.exon4;Parent=Dca54999.1
scaffold76	Augustus	exon	131225	131338	.	-	.	ID=Dca54999.1.exon5;Parent=Dca54999.1
scaffold76	Augustus	exon	131790	131873	.	-	.	ID=Dca54999.1.exon6;Parent=Dca54999.1
scaffold76	Augustus	exon	131969	132029	.	-	.	ID=Dca54999.1.exon7;Parent=Dca54999.1
scaffold76	Augustus	exon	132227	132276	.	-	.	ID=Dca54999.1.exon8;Parent=Dca54999.1
scaffold76	Augustus	exon	132882	133223	.	-	.	ID=Dca54999.1.exon9;Parent=Dca54999.1
scaffold76	Augustus	exon	133460	133681	.	-	.	ID=Dca54999.1.exon10;Parent=Dca54999.1
scaffold76	Augustus	exon	134236	134479	.	-	.	ID=Dca54999.1.exon11;Parent=Dca54999.1
scaffold76	Augustus	exon	135511	135598	.	-	.	ID=Dca54999.1.exon12;Parent=Dca54999.1
scaffold76	Augustus	exon	136083	136152	.	-	.	ID=Dca54999.1.exon13;Parent=Dca54999.1
scaffold76	Augustus	exon	136237	136292	.	-	.	ID=Dca54999.1.exon14;Parent=Dca54999.1
scaffold76	Augustus	exon	136410	136487	.	-	.	ID=Dca54999.1.exon15;Parent=Dca54999.1
scaffold76	Augustus	exon	136817	136936	.	-	.	ID=Dca54999.1.exon16;Parent=Dca54999.1
scaffold76	Augustus	exon	137078	137222	.	-	.	ID=Dca54999.1.exon17;Parent=Dca54999.1
scaffold76	Augustus	exon	137379	137457	.	-	.	ID=Dca54999.1.exon18;Parent=Dca54999.1
scaffold76	Augustus	exon	137541	137611	.	-	.	ID=Dca54999.1.exon19;Parent=Dca54999.1
scaffold76	Augustus	exon	137753	137829	.	-	.	ID=Dca54999.1.exon20;Parent=Dca54999.1
scaffold76	Augustus	exon	139057	139087	.	-	.	ID=Dca54999.1.exon21;Parent=Dca54999.1